ORF Python

 You will write a Python program that finds all the ORFs in a genomic sequence. 

A genomic sequence has 6 reading frames, corresponding to the six possible ways of translating the sequence into three-letter codons. Frame 1 treats each group of three bases as a codon, starting from the first base. Frame 2 starts at the second base, and frame 3 starts at the third base. Frames 4, 5 and 6 are defined in a similar way, but refer to the opposite strand, which is the reverse complement of the first strand. 

Specifications: 

Write a Python program called orfs to find all the open reading frames (ORFs) in the input sequence. 

INPUT: The program will take in as input a file, which will contain any number of DNA sequences in the FASTA format: – A line beginning with a “>” is the header line for the next sequence – All lines after the header contain sequence data. – There will be any number of sequences per file. – Sequences may be split over many lines. – Sequence data may be upper or lower case. – Sequence data may contain white space, which should be ignored. 

Ask the user for the minimum ORF to search for. The default is 50, which means your program should print out all ORFs with at least 50 bases. 

OUTPUT: 

Print your output in FASTA format, with one header line for each ORF, followed by the DNA in the ORF. The header should be the same as the header in the input file, followed by a bar “|” followed by FRAME = POS = LEN = , where is the frame number (1-6) 

is the genomic position of the start of the ORF (left end is base 1) is the length of the ORF (in bases) If N = 4, 5 or 6, then P should be a negative number that indicates the position of the start of the ORF from the right end of the sequence. The DNA in the ORF should be printed out with a space between each codon, and no more than 15 codons per line. 

Paper

Here’s the other one…

Seacliff Heights Goes Virtual

In this assignment, you will create a server virtualization adoption plan that explains the benefits of adopting server virtualization technology. This assignment expands upon the work completed in M3 Assignment 2 LASA 1.

Scenario:

Reread the scenario from M3 Assignment 2 LASA 1. Once you have reread the scenario, continue reading below.

The city manager of Seacliff Heights is impressed with your presentation on server and desktop virtualization solutions and agrees that it is a compelling technology. The manager would like you to create a server and desktop virtualization adoption plan that can be used to gain acceptance and create excitement for the project. The manager warns you that you will have a number of hurdles to overcome:

  • Though implementation of physical server and desktop computer virtualization will result in significant cost savings over time, it may also require a large upfront investment to purchase the virtualization software, maintenance, training, and consulting support.
  • Although they are generally “pro-technology,” the city council members in Seacliff Heights do not possess technological backgrounds. Thus, concepts such as virtualization are not readily understood.
  • The citizens of Seacliff Heights are much attuned to the expenditures of the city and demand fiscal responsibility. Additionally, the local newspaper has been running features highlighting local government spending.

It is your responsibility to create an adoption plan that will convince all of the stakeholders in this situation that server virtualization is a solution worth implementing.

Additionally, to prepare your staff members for working in a virtualized environment, you will create a technical document describing the installation of VMware Player and a sample virtual machine that they can then tinker with.

Tasks:

Part I: Server Virtualization Adoption Plan

Using Microsoft Word, develop an 8- to 10-page plan for server and desktop virtualization adoption applicable to the scenario. Your plan should:

  • Explain the fundamental concepts of server and desktop virtualization. This explanation of server and desktop virtualization should be written using a language easily understood by a nontechnical audience.
  • Identify three benefits of implementing server virtualization at the city of Seacliff Heights. Elaborate on how specifically the city will benefit by implementing server virtualization.
  • Identify three benefits of implementing desktop virtualization at the city of Seacliff Heights. Elaborate on how specifically the city will benefit by implementing desktop virtualization.
  • Describe two potential barriers to the city of Seacliff Heights’ adoption of server and desktop virtualization. Include responses to overcome these barriers, supporting them with research data where possible.
  • Offer two ideas on how to gain the support of stakeholders in Seacliff Heights, such as the city manager, city council, citizens, and newspaper reporters.

Part II: Technical Document

Using Microsoft Word, create a 5- to 10-page technical document describing:

  • The installation of the current version of VMware Player and the subsequent installation of the current version of Windows Server into a virtual machine.
  • What each screenshot is showing during the installation process, using the screenshots provided in the VMware Player and VM Installation Screenshots. The screenshots are presented using the order in which you would see them during installation.

Note: Use at least three sources (scholarly and nonacademic) to complete your research. Your writing should be clear, concise, and organized; demonstrate ethical scholarship in accurate representation and attribution of sources (i.e., APA); and display accurate spelling, grammar, and punctuation.

Data Analysis

Imagine your organization is going to build an application utilizing Big Data and Machine Learning. You are going to propose your idea to upper management with supporting system design. Develop an APA-formatted paper that presents a detailed analysis and research-based information pertaining to ALL of the following topics

  • List and describe the type of data you will need for your application, and how you will ensure the quality of the data.
  • List and explain the technologies, tools, and software packages that will be used to build the application.
    • Provide the design of your Big Data database. Explain why you chose the database compared to others. Also, include supporting theories for the schema you came up with.
    • Describe in detail why the chosen technologies are adequate to process the data.
    • List and describe the types of the statistical analysis methods that will be used.
  • List and describe the benefits from the customer’s perspective and organization’s perspective. Please pinpoint where the benefits are drawn from – data, technology, software package, process, and etc.
  • List and describe the concerns and downsides that may be introduced by the application and the Big Data from multiple perspectives – law, regulations, social, etc. Provide solutions, processes, application modules, etc. that mitigate the concerns, problems, issues.
  • Provide a data flow diagram, database design, and sample code of a module for your application.

OS and Memory Management

 

Assignment Overview

To fortify your understanding of operating system memory management,  this assignment requires students to study chapters 8, 9, 10, and 11 of  Garg and Verma’s 2017 book: Operating Systems: An Introduction.  

Case Assignment

Based on your own research, write a report to answer the following questions:

  • Discuss paging and segmentation, their similarities and differences (Chapter 8).
  • Briefly explain virtual memory concepts and page replacement algorithms (Chapter 9).
  • Explain Demand paging and Thrashing (Chapter 9).
  • Explain what Sequential and Indexed files are (Chapter 10).
  • When multiple interrupts occur simultaneously, a priority scheme  could be applied to decide the order in which the interrupts should be  handled. Discuss issues that need to be considered when assigning  priorities to different interrupts (Chapter 11).

Assignment Expectations

Using information from the modular background readings and any good  quality resource you can find, write a 3-page (excluding the title page  and reference pages), single-spaced report to address questions in this  assignment.

The following items will be assessed in particular:

  1. Your ability to address all questions based on reading materials and your own research.
  2. Your ability to write a report clearly and succinctly.

Exp19_Excel_Ch08_CapAssessment_Employee_Satisfaction

  Project Description:

You work as a data analyst for Camino Marketing, a U.S.-based web marketing company. You have been asked to conduct an employee satisfaction survey. As part of the survey, you will collect sample data to help provide insight into employee salaries, productivity within the three national offices, and to predict the growth of the New York office’s client base by 2025.

     

1

Start Excel. Download and open   the file named Exp19_Excel_Ch08_CapAssessment_EmployeeSatisfaction.xlsx.   Grader has automatically added your last name to the beginning of the   filename.

 

2

Ensure the Employee Satisfaction   worksheet is active, then use the FREQUENCY function to calculate the   frequency distribution of job satisfaction in column D. Place your results in   the range G5:G9.

 

3

Enter a function in cell G12 to   calculate the standard deviation of column c.

 

4

Enter a function in cell G13 to   calculate the variance between salaries. 

 

5

Enter a function in cell G14 to   calculate the Covariance of the salaries and job satisfaction in the data   set. Note this is a sample of data not a population.

 

6

Enter a function in cell F17 to   calculate the correlation coefficient between employee salary and job   satisfaction.

 

7

Ensure the Data Analysis ToolPak   add-in is active. Use the Data Analysis ToolPak to create a histogram based   on the salaries in column C. Use the range I4:I9 as the Bin Range. Ensure   that Cumulative percentage, column labels, and chart output are included in   the results. Place the results in cell K4. Edit the result text in cell K4 to   display   Salary, if   necessary.

 

8

Ensure the Office_Data worksheet   is active. Use the Data Analysis ToolPak to perform a single factor ANOVA on   the range C3:E35. Place the results starting in cell G3. Be sure to include   column labels. Resize columns G:M as needed.

 

9

Create a Forecast Sheet that   depicts year over year growth in customer growth. Set the Forecast end year   as 2025 and place the results on a new worksheet named 2025Forecast.

 

10

Ensure the Customers worksheet   is active then create a scatter plot chart that places the Years on the X   axis and the Clients on the Y axis. Add a linear trendline to the chart that   also shows the Equation and the R-square. Add the title Customer   Growth.

 

11

Enter a function in cell E4 to   calculate the intercept of the linear trendline created in the prior step.

 

12

Enter a function in cell F4 to   calculate the Slope of the linear trendline.

 

13

Enter a function in cell G4 to   calculate the R-square of the linear trendline.

 

14

Enter a function in cell H4 to   calculate the Standard Error. 

 

15

Use the FORECAST.LINEAR function   in cell E7 to the total number of customers by the end of 2021. 

 

16

Complete your analysis by added   formulas in the range F7:G7 to calculate the high and low thresholds of the   forecast.

 

17

Save and close Exp19_Excel_Ch08_CapAssessment_EmployeeSatisfaction.xlsx.   Exit Excel. Submit the file as directed.

Parking Charges

 A parking garage charges a $2.00 minimum fee to park for up to three hours. The garage charges an additional $0.50 per hour for each hour or part thereof in excess of three hours. The maximum charge for any given 24-hour period is $1 0.00. Assume that no car parks for longer than 24 hours at a time. Write an application that calculates and displays the parking charges for each customer who parked in the garage yesterday. You should enter the hours parked for each customer. The application should display the charge for the current customer and should calculate and display the running total of yesterday’s receipts. The application should use method Calculate-Charges to determine the charge for each customer. 

Please use C# and submit as a zip file.

Computer

This week you watched a video on how to input data and practiced with a spreadsheet. 

List five things you learned to do this week in excel?

Is this your first experience with this program? (If not share the experience)

If you were afraid of this program are you less fearful now? explain

This post needs to be 100-150 words in length using the APA-6th-Edition-Template-without-Abstract.dot 

CSP25 Homework 03

 CSP25 Homework 03
Part 1 : Use a Wordprocessor to type ANSWERS only. Save file as pdf then submit pdf file.

1. Write four statements only that will be part of an Assembly program that will define
four constants (use your own name) and each will store the decimal value 29 in decimal,
binary, octal and hexadecimal.
2. Write a statement that will be part of the data definition of an Assembly program that
will define a double word that will store in memory in big endian format.
3. Given the number 456789Abh, list out the byte values in little endian.
4. Write a statement that will be part of the data definition of an Assembly program that
will define an array of 120 uninitialized unsigned double words.

Part 2  
For these questions, submit screenshot of your code plus 2 outputs for part (b) and (d) of test
values given above.
Put all the same file as your work above.
5. Write an Assembly program that will add two numbers 9 and 4. Store result in EAX first
but later after the addition, move the result to a variable called sum which was defined
as a double word and intialzied to 0
6. Write an Assembly program that will add two numbers 9 and 4. Store result in AX first
but later after the addition, move the result to a variable called sum which was defined
as a word and intialzied to 0

Submit one pdf file that has all your work.
 

Strategic Integration Plan and Change Management Plan

  

Revise your Strategic Integration Plan according to the results of the Solution Testing. Solution testing results attached here.

The Strategic Integration Plan must follow this structure:

1.  

a. Executive summary

i. An executive summary is designed primarily to serve the person who, at least initially, does not intend to read the entire report. It usually states the main points of each section and emphasizes results, conclusions, and recommendations, usually in around three pages.

ii. Executive summaries are ideally suited to the needs of leaders who are seeking advice about a decision or a course of action. These summaries are called executive summaries because some decision makers rely wholly upon their advisors to read and evaluate the rest of the report.

iii. For the purposes of this assignment, the executive summary should be no more than two pages and should concentrate on the background of the problem, current state, and a summary of recommended solutions.

b. Organized sections of proposed solutions (for example, goals, objectives, action steps, protocols, resources, definition of terms, etc.)

c. References in APA format (for scholarly or practitioner resources that are cited or used within the plan)

d. ​Appendices (OPTIONAL—attached materials, tools, documents, samples, templates, etc. that are part of the solution)

Please include below points

2. The Change Management Plan must address the following:​

a. What will be improved with this solution? How will the problem be solved?

b. What is the process for using and communicating the Strategic Integration Plan among the organization’s leaders and employees?

c. What additional resources may be needed for successful implementation?

d. How will implementation be monitored for resistance (a normal part of change)?

e. How will successful virtuous leadership and team performance be celebrated?

f. What is the process for reviewing, revising, and continuously improving the solution?

Please make sure all the above points are included add at least 5 APA 7th edition references and make sure in text references are added for each sentence. 

minimum 6 pages of work required